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Teamwork has become more important in recent decades. We show that larger teams generate an unintended side effect: individuals who finish their PhD when the average team in their field is larger have worse career prospects. Our analysis combines data on career outcomes from the Survey of Doctorate Recipients with publication data that measures team size from ISI Web of Science. As average team size in a field increased over time, junior academic scientists became less likely to secure research funding or obtain tenure and were more likely to leave academia relative to their older counterparts. The team size effect can fully account for the observed decline in tenure prospects in academic science. The rise in team size was not associated with the end of mandatory retirement. However, the doubling of the NIH budget was associated with a significant increase in team size. Our results demonstrate that academic science has not adjusted its reward structure, which is largely individual, in response to team science. Failing to address these concerns means a significant loss as junior scientists exit after a costly and specialized education in science.